plotXY: Plot spatial image with data overlay
In ccb-hms/MerfishData: Collection of public MERFISH datasets
plotXY R Documentation
Plot spatial image with data overlay
Description
A helper function to overlay data onto a spatial image.
Usage
plotXY(df, col, img = NULL)
Arguments
df
A data.frame storing the data to plot.
col
character. A column of df to use for overlay onto the image.
img
a raster object representing a bitmap image.
Value
A ggplot.
Examples
gene <- rep(c("Cd44", "Cd8b1", "Cd79b"), each = 2)
x <- c(1693, 1701, 1820, 3188, 1631, 1881)
y <- c(1831, 1666, 1855, 6612, 1533, 942)
df <- data.frame(gene = gene, x = x, y = y)
plotXY(df, "gene")
ccb-hms/MerfishData documentation built on April 24, 2023, 7:08 a.m.
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| plotXY | R Documentation |
Plot spatial image with data overlay
Description
A helper function to overlay data onto a spatial image.
Usage
plotXY(df, col, img = NULL)
Arguments
df |
A |
col |
character. A column of |
img |
a raster object representing a bitmap image. |
Value
A ggplot.
Examples
gene <- rep(c("Cd44", "Cd8b1", "Cd79b"), each = 2)
x <- c(1693, 1701, 1820, 3188, 1631, 1881)
y <- c(1831, 1666, 1855, 6612, 1533, 942)
df <- data.frame(gene = gene, x = x, y = y)
plotXY(df, "gene")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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