tests/testthat/test_clinical.R
In cdiener/tcgar: A small helper package for using data from the Genomic Data Commons
# test_clinical.R
#
# Copyright 2016 Christian Diener <mail[at]cdiener.com>
#
# MIT license. See LICENSE for more information.
context("Clinical")
manifest <- system.file("extdata", "manifest.tsv", package="tcgar")
d <- tempdir()
test_that("Clinical data can be loaded", {
clin <- read_clinical(manifest, d, progress=FALSE)
expect_equal(ncol(clin), 17)
expect_equal(nrow(clin), 1)
expect_type(clin$follow_ups, "integer")
})
cdiener/tcgar documentation built on May 13, 2019, 2:41 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
# test_clinical.R
#
# Copyright 2016 Christian Diener <mail[at]cdiener.com>
#
# MIT license. See LICENSE for more information.
context("Clinical")
manifest <- system.file("extdata", "manifest.tsv", package="tcgar")
d <- tempdir()
test_that("Clinical data can be loaded", {
clin <- read_clinical(manifest, d, progress=FALSE)
expect_equal(ncol(clin), 17)
expect_equal(nrow(clin), 1)
expect_type(clin$follow_ups, "integer")
})
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.