findHDS: High DNA stainability (HDS) calculator

In chadsmith123/scsa: Analysis of Sperm Chromatin Structure Assay (SCSA) Flow Cytometry Data

Description

Plots a histogram of FACs input and allows the user to select the HDS threshold.

Usage

findHDS(x, channels, ...)

Arguments

x	data frame from scsaDat
channels	number of channels used in FACs acquisition
...	additional arguments to be passed

Value

Returns the HDS threshold selected by the user.

References

Evenson DP, Larson KL, Jost LK (2002) Sperm Chromatin Structure Assay: Its Clinical Use for Detecting Sperm DNA Fragmentation in Male Infertility and Comparisons With Other Techniques. Journal of Andrology, 23, 25–43.

See Also

scsa, scsaDat, findAlphat

Examples

## Not run: 
data(zf_facs)
x <- scsaDat(zf_facs)
findHDS(x)

## End(Not run)

chadsmith123/scsa documentation built on May 13, 2019, 3:09 p.m.