phyLengthbyT: Calculate branch length by reference ageT
In chaolab2019/chaoUtility: chao lab utility

Description Usage Arguments Value Examples

phyLengthbyT: Calculate branch length by reference ageT

1	phyLengthbyT(Ts, phy, datatype = "abundance", rootExtend = T)

`phy`	a phylogenetic tree with `"chaophytree"` class.
`datatype`	data type of input data: individual-based abundance data (`datatype = "abundance"`), species by sampling-units incidence matrix (`datatype = "incidence_raw"`).
`Tx`	a numerical vector of ageT.

a maxtrix with new branch length by ageT(Tx).

data(phybird)
bird.abu <- phybird$abun
bird.inc <- phybird$inci
bird.lab <- rownames(phybird$abun)
bird.phy <- phybird$chaophytree
phyLengthbyT(Ts=c(75,55),  phy=bird.phy, datatype="abundance")