chariff/Cytometree: Automated Cytometry Gating
Version 1.0.2

Given the hypothesis of a bimodal distribution of cells for each marker, the algorithm constructs a binary tree, the nodes of which are subpopulations of cells. At each node, observed cells and markers are modeled by both a family of normal distributions and a family of bimodal normal mixture distributions. Splitting is done according to a normalized difference of AIC between the two families.

Getting started

Package details

AuthorChariff Alkhassim, Boris Hejblum
MaintainerAlkhassim Chariff <[email protected]>
LicenseLGPL-3 | file LICENSE
Version1.0.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("chariff/Cytometree")
chariff/Cytometree documentation built on July 29, 2017, 2:54 p.m.