vis_heatmap2: Visualisation of matrices using heatmap3-based heatmaps

In charlotterich/immunarch_code: Painless Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires in R

Description

Visualise matrices with the functions based on the heatmap3 package with minimum amount of arguments.

Usage

vis_heatmap2(
  .data,
  .grid.size = 1.5,
  .title = NULL,
  .labs = NULL,
  col = colorRampPalette(c("#67001f", "#d6604d", "#f7f7f7", "#4393c3", "#053061"))(1024),
  ...
)

Arguments

.data	Input matrix. Column names and row names (if presented) will be used as names for labs.
.grid.size	Line width of the grid between cells.
.title	The text for the plot's title (same as the "main" argument in heatmap3).
.labs	A character vector of length two with names for x-axis and y-axis, respectively.
col	A vector specifying the colors (same as the "col" argument in heatmap3).
...	Other arguments for the heatmap3 function.

See Also

vis, repOverlap.

charlotterich/immunarch_code documentation built on Jan. 24, 2020, 12:08 a.m.