createFuzzyVector: High-dimensional representation of mass peaks

In chasemc/IDBacApp: MALDI-TOF MS Protien and Small Molecule Analysis

High-dimensional representation of mass peaks

Description

High-dimensional representation of mass peaks

Usage

createFuzzyVector(massStart, massEnd, ppm, massList, intensityList)

Arguments

massStart	beginning of mass range (as of now, must be smaller than smallest mass)
massEnd	end of mass range (as of now, must be smaller than smallest mass)
ppm	ppm tolerance
massList	list of mass vectors (eg list(1:10, 1:10))
intensityList	list of intesity vectors (eg list(1:10, 1:10))

Value

matrix where rows are samples and columns are variables (m/z preojections)

Examples

## Not run: 
masses <- list(Sample_A = c(5000,6000,7000), 
Sample_B = c(5000,6010,7005), Sample_C = c(5000,6010,7005))  
intensities <- list(Sample_A = rep(1, 3), 
Sample_B = rep(1, 3),
 Sample_C = rep(1, 3))
zx <- binnR(massStart = 3000,
            massEnd = 15000,
            ppm = 500,
            massList = masses,
            intensityList = intensities)
            
## End(Not run)

chasemc/IDBacApp documentation built on Dec. 23, 2024, 1:47 p.m.