Files in chrisamiller/copyCat
Find regions of genomic copy number loss and gain from short reads
DESCRIPTION
LICENSE
NAMESPACE
R/cnSegments.R
R/correction.R
R/functions.R
R/getReadDepth.R
R/meta.R
R/object.R
R/plotting.R
R/refineBreakpoints.R
R/samtools.R
R/zzz.R
README.md
debian/changelog
debian/compat
debian/control
debian/copyright
debian/rules
man/addBins.Rd
man/cnNeutralDepthFromHetSites.Rd
man/cnSegments.Rd
man/cnSegments.paired.Rd
man/copyCat-package.Rd
man/functions.Rd
man/gcCorrect.Rd
man/getAlts.Rd
man/getReadDepth.Rd
man/mapCorrect.Rd
man/mergeSegs.Rd
man/plotSegs.Rd
man/rdObject-class.Rd
man/refineBreakpoints.Rd
man/removeCoverageArtifacts.Rd
man/removeGapSpanningSegments.Rd
man/subtractBins.Rd
man/trimSegmentEnds.Rd
man/writeAlts.Rd
man/writeSegs.Rd
man/writeThresholds.Rd
