writeThresholds: writeThresholds

In chrisamiller/copyCat: Find regions of genomic copy number loss and gain from short reads

Description

write out a tab-delimited table of the calculated gain/loss thresholds to the file "output/thresholds.dat"

Usage

  writeThresholds(rdo)

Arguments

rdo	a readDepth object created with new("rdObject")

Examples

  ##get regions of CN gain and loss
  #  x <- new("rdObject")

  ##write out the table
  #  writeThresholds(x)

chrisamiller/copyCat documentation built on July 20, 2021, 12:59 a.m.