extract.genefromguide: Extraction of gene names
In christensensm/COMPOSE: Calculation and Visualization of Phenotypic CRISPR Screens
Description
Usage
Arguments
Value
Examples
View source: R/extract.genefromguide.R
Description
Extraction of gene names from rownames that contain single guide RNA IDs
Usage
1
extract.genefromguide(data, neg.controls, split = "_")
Arguments
data
input matrix containing normalized gRNA counts with gRNA ids as row names
neg.controls
input dataframe containing sample names and other identifiers or data
split
string identifying cell line on which to filter counts
Value
new data with added column of gene names
Examples
1
new.L2FC <- extract.genefromguide(L2FC, neg.controls, split = '_')
christensensm/COMPOSE documentation built on Dec. 22, 2020, 3:43 a.m.
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Description Usage Arguments Value Examples
View source: R/extract.genefromguide.R
Description
Extraction of gene names from rownames that contain single guide RNA IDs
Usage
1 | extract.genefromguide(data, neg.controls, split = "_")
|
Arguments
data |
input matrix containing normalized gRNA counts with gRNA ids as row names |
neg.controls |
input dataframe containing sample names and other identifiers or data |
split |
string identifying cell line on which to filter counts |
Value
new data with added column of gene names
Examples
1 | new.L2FC <- extract.genefromguide(L2FC, neg.controls, split = '_')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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