plot_sigguides: Bidirectional barplot for sgRNA fold-change results
In christensensm/COMPOSE: Calculation and Visualization of Phenotypic CRISPR Screens
Description
Usage
Arguments
See Also
Examples
View source: R/plot_sigguides.R
Description
Visualize the number of significantly enriched/depleted sgRNAs
Usage
1
plot_sigguides(results, print = T, save = F, sig.cutoff = 0.05, cutoff = 1)
Arguments
results
a calc.DESeq2.L2FC object
print
logical - do you want to print the plot to plots
save
logical - do you want to save the plot to pdf
sig.cutoff
adjusted p-value cutoff for sgRNA fold-changes
fc.cutoff
log2 fold-change cutoff for sgRNAs
See Also
ggplot which this function uses to plot
Examples
1
christensensm/COMPOSE documentation built on Dec. 22, 2020, 3:43 a.m.
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Description Usage Arguments See Also Examples
View source: R/plot_sigguides.R
Description
Visualize the number of significantly enriched/depleted sgRNAs
Usage
1 | plot_sigguides(results, print = T, save = F, sig.cutoff = 0.05, cutoff = 1)
|
Arguments
results |
a calc.DESeq2.L2FC object |
print |
logical - do you want to print the plot to plots |
save |
logical - do you want to save the plot to pdf |
sig.cutoff |
adjusted p-value cutoff for sgRNA fold-changes |
fc.cutoff |
log2 fold-change cutoff for sgRNAs |
See Also
ggplot which this function uses to plot
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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