get_Sinclair_Z: Get Sinclair Z
In cmlegault/ASAPplots: Creates Standard Plots and PDFs for ASAP3
View source: R/Sinclair_Z_functions.r
Description
Set of functions to prepare index matrices and compute and plot Sinclair Z. Estimate Z from catch curves using 4 year moving window with cohort-specific coefficients. Based on Sinclair 2001 ICES J Mar Sci 58: 1-10. Note hard wired to use only ages that are at least 90 percent selected.
Usage
1
get_Sinclair_Z(asap, a1, index.names, save.plots, od, plotf)
Arguments
asap
name of the variable that read in the asap.rdat file
a1
list file produced by grab.aux.files function
index.names
names of indices
save.plots
save individual plots
od
output directory for plots and csv files
plotf
type of plot to save
cmlegault/ASAPplots documentation built on March 29, 2021, 8:28 p.m.
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View source: R/Sinclair_Z_functions.r
Description
Set of functions to prepare index matrices and compute and plot Sinclair Z. Estimate Z from catch curves using 4 year moving window with cohort-specific coefficients. Based on Sinclair 2001 ICES J Mar Sci 58: 1-10. Note hard wired to use only ages that are at least 90 percent selected.
Usage
1 | get_Sinclair_Z(asap, a1, index.names, save.plots, od, plotf)
|
Arguments
asap |
name of the variable that read in the asap.rdat file |
a1 |
list file produced by grab.aux.files function |
index.names |
names of indices |
save.plots |
save individual plots |
od |
output directory for plots and csv files |
plotf |
type of plot to save |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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