compbiomed/TBSignatureProfiler: Profile RNA-Seq Data Using TB Pathway Signatures

Signatures of TB progression, TB disease, and other TB disease states have been created. This package makes it easy to profile RNA-Seq data using these signatures and common signature profiling tools including ASSIGN, GSVA, and ssGSEA.

Getting started

Package details

Bioconductor views DifferentialExpression GeneExpression
Maintainer
LicenseMIT + file LICENSE
Version0.0.0.9004
URL https://github.com/dfjenkins3/TBSignatureProfiler
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("compbiomed/TBSignatureProfiler")
compbiomed/TBSignatureProfiler documentation built on Nov. 9, 2018, 9:50 p.m.