deseq2_norm_rle: Normalize gene expression count data.
In compbiomed/TBSignatureProfiler: Profile RNA-Seq Data Using TB Pathway Signatures
deseq2_norm_rle R Documentation
Normalize gene expression count data.
Description
Normalize gene expression count data.
Usage
deseq2_norm_rle(inputData)
Arguments
inputData
a data.frame or matrix of gene expression
count data. Required.
Value
A data.frame or matrix of normalized count data.
Examples
## Example using the counts assay from a SummarizedExperiment
data_in <- SummarizedExperiment::assay(TB_indian, "counts")
res <- deseq2_norm_rle(data_in)
compbiomed/TBSignatureProfiler documentation built on Oct. 29, 2024, 6:07 a.m.
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| deseq2_norm_rle | R Documentation |
Normalize gene expression count data.
Description
Normalize gene expression count data.
Usage
deseq2_norm_rle(inputData)
Arguments
inputData |
a |
Value
A data.frame or matrix of normalized count data.
Examples
## Example using the counts assay from a SummarizedExperiment
data_in <- SummarizedExperiment::assay(TB_indian, "counts")
res <- deseq2_norm_rle(data_in)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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