LOOAUC_simple_multiple_noplot_one_df: Perform Leave-one-out CV with Logistic Regression.

In compbiomed/TBSignatureProfiler: Profile RNA-Seq Data Using TB Pathway Signatures

Perform Leave-one-out CV with Logistic Regression.

Description

Perform Leave-one-out CV with Logistic Regression.

Usage

LOOAUC_simple_multiple_noplot_one_df(df, targetVec)

Arguments

df	a data.frame of gene expression count data. Required.
targetVec	a binary vector of the response variable. Should be the same number of samples as in df. Required.

Value

A list of length 3 with elements

auc	The AUC from the LOOCV procedure.
byClass	A vector containing the sensitivity, specificity, positive predictive value, negative predictive value, precision, recall, F1, prevalence, detection rate, detection prevalence and balanced accuracy.
prob	A vector of the test prediction probabilities.

compbiomed/TBSignatureProfiler documentation built on Oct. 29, 2024, 6:07 a.m.