DatasetExperiment_heatmap: DatasetExperiment heatmap

In computational-metabolomics/structToolbox: Data processing & analysis tools for Metabolomics and other omics

DatasetExperiment heatmap

Description

A heatmap to visualise the measured values in a data matrix.

Usage

DatasetExperiment_heatmap(na_colour = "#FF00E4", ...)

Arguments

na_colour	(character) The hex colour code used to plot missing values. The default is "#FF00E4".
...	Additional slots and values passed to struct_class.

Details

This object makes use of functionality from the following packages:

• reshape2

Value

A DatasetExperiment_heatmap object. This object has no output slots. See chart_plot in the struct package to plot this chart object.

Inheritance

A DatasetExperiment_heatmap object inherits the following struct classes:

⁠[DatasetExperiment_heatmap]⁠ >> ⁠[chart]⁠ >> ⁠[struct_class]⁠

References

Wickham H (2007). "Reshaping Data with the reshape Package." Journal of Statistical Software, 21(12), 1-20. http://www.jstatsoft.org/v21/i12/.

Examples

M = DatasetExperiment_heatmap(
      na_colour = "#FF00E4")

D = iris_DatasetExperiment()
C = DatasetExperiment_heatmap()
chart_plot(C,D)

computational-metabolomics/structToolbox documentation built on Feb. 12, 2024, 2:15 a.m.