compare_dist: Compare distributions

In computational-metabolomics/structToolbox: Data processing & analysis tools for Metabolomics and other omics

Compare distributions

Description

Histograms and boxplots computed across samples and features are used to visually compare two datasets e.g. before and after filtering and/or normalisation.

Usage

compare_dist(factor_name, ...)

Arguments

factor_name	(character) The name of a sample-meta column to use.
...	Additional slots and values passed to struct_class.

Value

A compare_dist object. This object has no output slots. See chart_plot in the struct package to plot this chart object.

Inheritance

A compare_dist object inherits the following struct classes:

⁠[compare_dist]⁠ >> ⁠[chart]⁠ >> ⁠[struct_class]⁠

Examples

M = compare_dist(
      factor_name = "V1")

D1=MTBLS79_DatasetExperiment(filtered=FALSE)
D2=MTBLS79_DatasetExperiment(filtered=TRUE)
C = compare_dist(factor_name='Class')
chart_plot(C,D1,D2)

computational-metabolomics/structToolbox documentation built on Feb. 12, 2024, 2:15 a.m.