| align | Return GRanges of uniquely mapping hits. |
| expand_rle | Insert into Rle runLength. |
| gr_masked | Remove motifs from BSgenomeViews |
| kmap | kmap: Generate mappable regions of the genome for a given... |
| kmerize | Chop up BSgenomeViews into overlapping k-mers. |
| mappable | Return mappable regions of a genome for a given k-mer size. |
| mappable_cache | Internal helper functions to manage mappable GRanges in... |
| reexports | Objects exported from other packages |
| stddna | Subset to standard DNA bases |
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