API for cparsania/FungiExpresZ
FungiExpresZ: Fungal gene expression data analysis and visualizations
| Global functions | |
|---|---|
| .filter_samples_by_mapping_rate | Man page Source code |
| .get_annotations_from_fungal_sra_run_info_table | Man page Source code |
| .get_annotations_from_sradb | Man page Source code |
| add_gene_groups | Man page Source code |
| add_gene_groups_ui | Man page Source code |
| add_sample_group | Man page Source code |
| add_sample_group_ui | Man page Source code |
| app_server | Man page Source code |
| app_ui | Man page Source code |
| badge_custom_url | Man page |
| badge_devel_url | Man page |
| badge_github_release_url | Man page |
| check_var_types | Man page Source code |
| cluster_wise_sample_information_server | Man page Source code |
| cluster_wise_sample_information_ui | Man page Source code |
| col_12 | Source code |
| col_4 | Source code |
| col_6 | Source code |
| cross_ref_go_db | Man page |
| decorate_ggplot | Man page Source code |
| display | Source code |
| display_active_groups_server | Man page Source code |
| display_active_groups_ui | Man page Source code |
| display_sra_sample_info_server | Man page Source code |
| display_sra_sample_info_ui | Man page Source code |
| download_gene_expression_matrix | Man page Source code |
| download_gene_expression_matrix_server | Man page Source code |
| download_go_data_server | Man page Source code |
| download_go_data_ui | Man page Source code |
| drop_nulls | Source code |
| enurl | Source code |
| export_base_graphics | Man page Source code |
| export_base_graphics_ui | Man page Source code |
| export_plot | Man page Source code |
| export_plot_ui | Man page Source code |
| functional_analysis_server | Man page Source code |
| functional_analysis_ui | Man page Source code |
| gene_group_selection | Man page Source code |
| gene_group_selection_ui | Man page Source code |
| generate_random_strings | Man page Source code |
| get_ca_gene_names_mapping | Man page |
| get_density | Man page Source code |
| get_expression_mats_dir_path | Man page Source code |
| get_gg_colors | Man page Source code |
| get_test_data | Man page Source code |
| get_updated_existing_annotations | Man page Source code |
| ggplot_fill_and_facet | Man page Source code |
| ggplot_fill_and_facet_ui | Man page Source code |
| ggplot_fill_colour | Man page Source code |
| ggplot_fill_colour_ui | Man page Source code |
| golem_add_external_resources | Source code |
| joy_plot_fill_and_facet_ui | Man page Source code |
| joyplot_fill_and_facet | Man page Source code |
| jq_hide | Source code |
| list_to_li | Source code |
| list_to_p | Source code |
| lm_eqn | Man page Source code |
| mod_pathway_analysis_server | Man page Source code |
| mod_pathway_analysis_ui | Man page Source code |
| my_filter | Man page Source code |
| named_to_li | Source code |
| perform_go_enrichmet | Man page |
| plot_title_and_axis_label_server | Man page Source code |
| plot_title_and_axis_label_ui | Man page Source code |
| prepare_annotations_for_fungiexpres_data_matrix | Man page Source code |
| prepare_fungiexpresz_fpkm_matrix_rds_files_from_stringTie_output | Man page Source code |
| reorder_clusters | Man page Source code |
| rep_br | Source code |
| run_app | Man page Source code |
| shinyInput | Man page Source code |
| tagRemoveAttributes | Source code |
| text_to_clean_document | Man page |
| text_to_tibble | Man page |
| tibble_to_row_clusters | Man page Source code |
| tibble_to_rowwise_sd_zs | Man page Source code |
| undisplay | Source code |
| with_red_star | Source code |
| word_cloud_server | Man page Source code |
| word_cloud_ui | Man page Source code |
