get_updated_existing_annotations: Get updated annotations objects (sample_info &...
In cparsania/FungiExpresZ: FungiExpresZ: Fungal gene expression data analysis and visualizations
View source: R/prepare_fpkm_files_from_excel_data_functions.R
get_updated_existing_annotations R Documentation
Get updated annotations objects (sample_info & ref_annot_to_expr_rds) of FungiExpreZ.
Description
Get updated annotations objects (sample_info & ref_annot_to_expr_rds) of FungiExpreZ.
Usage
get_updated_existing_annotations(new_sample_info = sample_info)
Arguments
new_sample_info
a tibble of SRA annotations associated with 'new_data_matrix'. This object can be generated using the function [FungiExpresZ::prepare_annotations_for_fungiexpres_data_matrix()].
Details
This function returns a list of two objects -
1) updated_ref_annot_to_expr_rds: This is the updated version of existing FungiExpresZ object -> 'ref_annot_to_expr_rds'.
2) updated_sample_info: This is the updated version of existing FungiExpresZ object -> 'sample_info'.
Both these objects will be added R/sysdata.rda.
Internally it uses FungiExpresZ:::sample_info and FungiExpresZ:::ref_annot_to_expr_rds to get the access to existing annotaions.
Value
a list of two -> updated_ref_annot_to_expr_rds, updated_sample_info.
cparsania/FungiExpresZ documentation built on March 15, 2024, 5:48 p.m.
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View source: R/prepare_fpkm_files_from_excel_data_functions.R
| get_updated_existing_annotations | R Documentation |
Get updated annotations objects (sample_info & ref_annot_to_expr_rds) of FungiExpreZ.
Description
Get updated annotations objects (sample_info & ref_annot_to_expr_rds) of FungiExpreZ.
Usage
get_updated_existing_annotations(new_sample_info = sample_info)
Arguments
new_sample_info |
a tibble of SRA annotations associated with 'new_data_matrix'. This object can be generated using the function [FungiExpresZ::prepare_annotations_for_fungiexpres_data_matrix()]. |
Details
This function returns a list of two objects - 1) updated_ref_annot_to_expr_rds: This is the updated version of existing FungiExpresZ object -> 'ref_annot_to_expr_rds'. 2) updated_sample_info: This is the updated version of existing FungiExpresZ object -> 'sample_info'. Both these objects will be added R/sysdata.rda.
Internally it uses FungiExpresZ:::sample_info and FungiExpresZ:::ref_annot_to_expr_rds to get the access to existing annotaions.
Value
a list of two -> updated_ref_annot_to_expr_rds, updated_sample_info.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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