crickbabs/RNASeq-DESeq: DESeq2 Wrapper For Pre-Specified Analyses
Use DESeq2 to automate RNASeq analysis using a standard '.spec' template file to specify multiple subsets of the data, design models, and contrasts. Also provides tools to help generate comparisons according to 'emmeans' specification formulae. Produces a nested list of DESeqDataSet objects (with their results embedded) and a markdown report containing visualisations of the datasets.
Getting started
Browse package contents
Package details |
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| Bioconductor views | RNASeq |
| Maintainer | |
| License | GPL-3 |
| Version | 0.22.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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