rebase: Rebase a factor's level
In crickbabs/RNASeq-DESeq: DESeq2 Wrapper For Pre-Specified Analyses
rebase R Documentation
Rebase a factor's level
Description
Change a factor's reference level
Usage
rebase(x, lev)
Arguments
x
A factor to be rebased
lev
The level of the factor that is to be regarded as the 'control' to which all others will be compared
Details
Rather than change the order of the levels, this changes the way
the factor is parametrised, so that the levels are in the natural order
but the coefficients can reflect experimental design considerations
Value
A factor with a new contrast attribute
Author(s)
Gavin Kelly
crickbabs/RNASeq-DESeq documentation built on Jan. 7, 2023, 11:23 p.m.
R Package Documentation
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| rebase | R Documentation |
Rebase a factor's level
Description
Change a factor's reference level
Usage
rebase(x, lev)
Arguments
x |
A factor to be rebased |
lev |
The level of the factor that is to be regarded as the 'control' to which all others will be compared |
Details
Rather than change the order of the levels, this changes the way the factor is parametrised, so that the levels are in the natural order but the coefficients can reflect experimental design considerations
Value
A factor with a new contrast attribute
Author(s)
Gavin Kelly
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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