API for crickbabs/RNASeq-DESeq
DESeq2 Wrapper For Pre-Specified Analyses

Global functions
.resNames Source code
ParamList Man page
add_dim_reduct Man page Source code
all_identical Source code
bookdown_label Man page Source code
build_dds_list Man page Source code
captioner Man page Source code
check_model Man page Source code
classify_terms Source code
comparison_name Source code
d3_iMetric Man page Source code
d3_iMetric-shiny Man page
d3_iMetricOutput Man page Source code
d3_iMetric_html Source code
d3_iScatter Man page Source code
d3_iScatter-shiny Man page
d3_iScatterOutput Man page Source code
d3_iScatter_html Source code
dataset_name Source code
dendro_all Source code
df2colorspace Man page
differential_MA Man page
differential_heatmap Man page Source code
dmc2frame Source code
emcontrasts Man page Source code
enrichment Man page Source code
export_biologic Man page
extract_assay Man page Source code
extract_colData Man page Source code
extract_model Source code
extract_pca_x Man page Source code
extract_results Man page Source code
fitLRT Man page Source code
fit_models Man page Source code
full_model Source code
get_result Man page Source code
get_started Man page Source code
get_terms Source code
klabel Man page Source code
load_specs Man page Source code
map_des Man page Source code
model_name Source code
mult_comp Man page Source code
org2reactome Source code
over_representation Man page Source code
part.resid Source code
qc_heatmap Man page Source code
rbind_summary Man page Source code
read_yml Source code
rebase Man page Source code
recode_within Man page Source code
renderd3_iMetric Man page Source code
renderd3_iScatter Man page Source code
residual_heatmap_transform Source code
results_apply Man page Source code
run_report Man page Source code
subsample Man page Source code
summarise_results Man page Source code
sym_colour Source code
tab_link_caption Man page Source code
table1 Man page Source code
tidy_per_gene Source code
tidy_significant_dds Source code
to_letter Source code
trim_map Source code
write_all_results Man page Source code
write_assay Man page Source code
write_results Man page Source code
crickbabs/RNASeq-DESeq documentation built on Jan. 7, 2023, 11:23 p.m.