Man pages for croesel/Trans2Kegg
Annotate transcripts and predicted protein sequences

annotateAWSAnnotate DE transcripts using NCBI BLAST AMI
annotateDEGet KEGG information for DE transcripts
dot-blastSequencesToDataFrameAWSBLAST Sequences to dataframe
dot-tryParseResultAwsParse results from AWS BLAST
getKeggGet KEGG Ortholog info for BLAST Results
getPathDetailsGet KEGG pathway details for one path
getPathwaysGet KEGG pathway information for annotated transcripts
localBlastPerform a local BLAST of DE transcripts
mergeAnnotationsMerge DE, BLAST, KEGG Info and filter
mergePathsMerge pathway information and summarize DE counts
croesel/Trans2Kegg documentation built on May 12, 2019, 3:11 p.m.