Pick a ChromHMM model

hmmpick | Pick the ChromHMM model that is most well-defined |

hmmpick_cost_state | Cost of a state |

hmmpick_cost_states | Helper to calculate the cost of the different states (used... |

hmmpickr-package | Pick a ChromHMM model |

homogeneity_cost | Calculate homogeneity cost |

load_chromhmm_emissions | Load ChromHMM emission probabilities |

load_chromhmm_model | Load ChromHMM model file |

load_chromhmm_overlap_enrichments | Load ChromHMM overlap enrichment file |

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