clusdecAccuracy: Accuracy for all combination of clusters

Description Usage Arguments Value Examples

Description

Accuracy for all combination of clusters

Usage

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clusdecAccuracy(dataset, cellTypesNumber, cores = 1)

Arguments

dataset

matrix, clustered dataset

cellTypesNumber

numeric, expected number of cell types

cores

numeric, how many cores to use

Value

matrix, matrix of estimated accuracy (log Frobenius norm) for every combination

Examples

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data('datasetLiverBrainLung')
preprocessed <- preprocessDataset(datasetLiverBrainLung, k=5) # 5 clusters
accuracy <- clusdecAccuracy(preprocessed, 3) # assuming 3 cell types

## Not run: 
accuracy <- clusdecAccuracy(preprocessed, 3, cores=2) # using 2 CPU cores

## End(Not run)

ctlab/ClusDec documentation built on May 14, 2019, 12:29 p.m.