Description Usage Arguments Value Examples
Accuracy for all combination of clusters
1 | clusdecAccuracy(dataset, cellTypesNumber, cores = 1)
|
dataset |
matrix, clustered dataset |
cellTypesNumber |
numeric, expected number of cell types |
cores |
numeric, how many cores to use |
matrix, matrix of estimated accuracy (log Frobenius norm) for every combination
1 2 3 4 5 6 7 8 | data('datasetLiverBrainLung')
preprocessed <- preprocessDataset(datasetLiverBrainLung, k=5) # 5 clusters
accuracy <- clusdecAccuracy(preprocessed, 3) # assuming 3 cell types
## Not run:
accuracy <- clusdecAccuracy(preprocessed, 3, cores=2) # using 2 CPU cores
## End(Not run)
|
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