deconvolveClusters: Deconvolution by given set of clusters

Description Usage Arguments Value Examples

Description

Runs DSA with given clusters as putative signatures

Usage

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deconvolveClusters(dataset, clusters)

Arguments

dataset

matrix, given dataset to perform deconvolution

clusters

numeric vector, clusters to use as putative signatures

Value

list with matrices W and H

Examples

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data('datasetLiverBrainLung')
preprocessed <- preprocessDataset(datasetLiverBrainLung, k=5) # 5 clusters
results <- deconvolveClusters(preprocessed, c(1, 2, 4)) # use clusters 1, 2 and 4 as putative signatures

ctlab/ClusDec documentation built on May 14, 2019, 12:29 p.m.