pairwise_sequence_identity_histogram: Plot a histogram with the pairwise identity percentages...
In currocam/utilsHMMER: HMMERutils
View source: R/pairwise_alignment.R
pairwise_sequence_identity_histogram R Documentation
Plot a histogram with the pairwise identity percentages (without the
diagonal).
Description
Plot a histogram with the pairwise identity percentages (without the
diagonal).
Usage
pairwise_sequence_identity_histogram(data)
Arguments
data
A Data Frame obtained from pairwise_alignment_sequence_identity.
Value
A ggplot object
Examples
data(phmmer_2abl)
pairwise_alignment_sequence_identity(
seqs = phmmer_2abl$hits.fullfasta[6:10],
aln_type = "overlap",
pid_type = "PID2"
) %>%
pairwise_sequence_identity_histogram()
currocam/utilsHMMER documentation built on Feb. 19, 2023, 9:54 p.m.
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View source: R/pairwise_alignment.R
| pairwise_sequence_identity_histogram | R Documentation |
Plot a histogram with the pairwise identity percentages (without the diagonal).
Description
Plot a histogram with the pairwise identity percentages (without the diagonal).
Usage
pairwise_sequence_identity_histogram(data)
Arguments
data |
A Data Frame obtained from pairwise_alignment_sequence_identity. |
Value
A ggplot object
Examples
data(phmmer_2abl)
pairwise_alignment_sequence_identity(
seqs = phmmer_2abl$hits.fullfasta[6:10],
aln_type = "overlap",
pid_type = "PID2"
) %>%
pairwise_sequence_identity_histogram()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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