plotGSEAEnrichment: Generate a plotly-based GSEA Enrichment plot

In cusom/CUSOM.ShinyHelpers: CU School of Medicine Helper Functions for Shiny Applications

Generate a plotly-based GSEA Enrichment plot

Description

Generate a plotly-based GSEA Enrichment plot

Usage

plotGSEAEnrichment(pathName, stats, res, title = "", gseaParam = 0)

Arguments

pathName	GSEA Pathway Name (Gene Set Name)
stats	GSEA ranked data ()
res	GSEA scored data (Gene.set, Size, ES, NES, p.value, q.value, gene set)
title	string plot title
gseaParam	int GSEA parameter value, all gene-level statis are raised to the power of 'gseaParam' before calculation of GSEA enrichment scores.

Value

plotly plot object

cusom/CUSOM.ShinyHelpers documentation built on Oct. 23, 2023, 6:50 a.m.