dataset.collapse.pc.singular: dataset.collapse.pc.singular
In cvraut/iBAGpkg: integrative Bayesian Analysis of the Genome
dataset.collapse.pc.singular R Documentation
dataset.collapse.pc.singular
Description
Collapses data which has >1 column per gene using PCA
Usage
data.collapse(mrna, data)
Arguments
mrna
: dataframe for mrna (follows demo)
dataset
: dataset that needs to consolidated (follows format demo)
PC_VAR_THRESH
(0.09): The % threshold for PCs to accept based on scale of eigenvalue (must be <1)
pc_collapse
: The additional consolidation function applied to selected PCs. (default take the max)
DEBUG
FALSE: flag to print debug statements
cvraut/iBAGpkg documentation built on July 26, 2022, 9:55 p.m.
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| dataset.collapse.pc.singular | R Documentation |
dataset.collapse.pc.singular
Description
Collapses data which has >1 column per gene using PCA
Usage
data.collapse(mrna, data)
Arguments
mrna |
: dataframe for mrna (follows demo) |
dataset |
: dataset that needs to consolidated (follows format demo) |
PC_VAR_THRESH |
(0.09): The % threshold for PCs to accept based on scale of eigenvalue (must be <1) |
pc_collapse |
: The additional consolidation function applied to selected PCs. (default take the max) |
DEBUG |
FALSE: flag to print debug statements |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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