mpred: Predict unmeasured metabolites

#' Metabolite data of RC 12 
#'
#' A dataset containing metbolite measure of patients from RC 12 study
#'
#' @format A data frame with 637 rows and 281 variables:
#' \describe{
#'   \item{metabolite}{metabolite}
#'   \item{sample}{each sample is a patient}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"RC12"


#' Sample information of RC 12 
#'
#' A dataset containing all the patient information from RC 12 study
#'
#' @format A data frame with 280 rows and 29 variables:
#' \describe{
#'   \item{SAMPLE_ID}{sample identification code}
#'   \item{TISSUE}{}
#'   \item{GROUP_ID}{}
#'   \item{PAIR}{}
#'   \item{MATCHED_PAIR}{}
#'   \item{SAMPLE_PREFIX}{}
#'   \item{Group}{whether patient had tumor or not}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"RC12_sampleinfo"

#' Metabolite data of RC 18
#'
#' A dataset containing metbolite measure of patients from RC 18 study
#'
#' @format A data frame with 668 rows and 185 variables:
#' \describe{
#'   \item{metabolite}{metabolite}
#'   \item{sample}{each sample is a patient}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"RC18"


#' Sample information of RC 18
#'
#' A dataset containing all the patient information from RC 18 study
#'
#' @format A data frame with 184 rows and 15 variables:
#' \describe{
#'   \item{SAMPLE_ID}{sample identification code}
#'   \item{TISSUE}{}
#'   \item{GROUP_ID}{}
#'   \item{PAIR}{}
#'   \item{MATCHED_PAIR}{}
#'   \item{SAMPLE_PREFIX}{}
#'   \item{Group}{whether patient had tumor or not}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"RC18_sampleinfo"



#' Metabolite data of BC Tang
#'
#' A dataset containing metbolite measure of patients from BC Tang study
#'
#' @format A data frame with 356 rows and 31 variables:
#' \describe{
#'   \item{metabolite}{metabolite}
#'   \item{sample}{each sample is a patient}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"BC_tang"


#' Sample information of BC Tang
#'
#' A dataset containing all the patient information from BC Tang study
#'
#' @format A data frame with 30 rows and 8 variables:
#' \describe{
#'   \item{SAMPLE_ID}{sample identification code}
#'   \item{TISSUE}{}
#'   \item{GROUP_ID}{}
#'   \item{PAIR}{}
#'   \item{MATCHED_PAIR}{}
#'   \item{SAMPLE_PREFIX}{}
#'   \item{Group}{whether patient had tumor or not}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"BC_tang_sampleinfo"




#' Metabolite data of BC Terunuma
#'
#' A dataset containing metbolite measure of patients from BC Terunumastudy
#'
#' @format A data frame with 259 rows and 133 variables:
#' \describe{
#'   \item{metabolite}{metabolite}
#'   \item{sample}{each sample is a patient}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"BC_terunuma"


#' Sample information of BC Terunuma
#'
#' A dataset containing all the patient information from BC Terunuma study
#'
#' @format A data frame with 132 rows and 19 variables:
#' \describe{
#'   \item{SAMPLE_ID}{sample identification code}
#'   \item{TISSUE}{}
#'   \item{GROUP_ID}{}
#'   \item{PAIR}{}
#'   \item{MATCHED_PAIR}{}
#'   \item{SAMPLE_PREFIX}{}
#'   \item{Group}{whether patient had tumor or not}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"BC_terunuma_sampleinfo"



####
#' Metabolite data of HCC
#'
#' A dataset containing metbolite measure of patients from HCC study
#'
#' @format A data frame with xx rows and xx variables:
#' \describe{
#'   \item{metabolite}{metabolite}
#'   \item{sample}{each sample is a patient}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"HCC"


#' Sample information of HCC
#'
#' A dataset containing all the patient information from HCC study
#'
#' @format A data frame with XX rows and XX variables:
#' \describe{
#'   \item{SAMPLE_ID}{sample identification code}
#'   \item{TISSUE}{}
#'   \item{GROUP_ID}{}
#'   \item{PAIR}{}
#'   \item{MATCHED_PAIR}{}
#'   \item{SAMPLE_PREFIX}{}
#'   \item{Group}{whether patient had tumor or not}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"HCC_sampleinfo"


##
#' Metabolite data of DLBCL
#'
#' A dataset containing metbolite measure of patients from DLBCL study
#'
#' @format A data frame with xx rows and xx variables:
#' \describe{
#'   \item{metabolite}{metabolite}
#'   \item{sample}{each sample is a patient}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"DLBCL"


#' Sample information of DLBCL
#'
#' A dataset containing all the patient information from DLBCL study
#'
#' @format A data frame with 30 rows and 8 variables:
#' \describe{
#'   \item{SAMPLE_ID}{sample identification code}
#'   \item{TISSUE}{}
#'   \item{GROUP_ID}{}
#'   \item{PAIR}{}
#'   \item{MATCHED_PAIR}{}
#'   \item{SAMPLE_PREFIX}{}
#'   \item{Group}{whether patient had tumor or not}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"DLBCL_sampleinfo"


#' Metabolite data of PaCa
#'
#' A dataset containing metbolite measure of patients from PaCa study
#'
#' @format A data frame with xx rows and xx variables:
#' \describe{
#'   \item{metabolite}{metabolite}
#'   \item{sample}{each sample is a patient}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"PaCa"


#' Sample information of PaCa
#'
#' A dataset containing all the patient information from PaCa study
#'
#' @format A data frame with xx rows and xx variables:
#' \describe{
#'   \item{SAMPLE_ID}{sample identification code}
#'   \item{TISSUE}{}
#'   \item{GROUP_ID}{}
#'   \item{PAIR}{}
#'   \item{MATCHED_PAIR}{}
#'   \item{SAMPLE_PREFIX}{}
#'   \item{Group}{whether patient had tumor or not}
#'   ...
#' }
#' @source \url{http://www.diamondse.info/}
"PaCa_sampleinfo"