API for czarrar/connectir
connectir 0.2.1
| Global functions | |
|---|---|
| .archive.load_and_mask_func_data | Source code |
| .check_func_paths | Source code |
| .check_mask_paths | Source code |
| .distance_chebyshev | Source code |
| .distance_concordance | Source code |
| .distance_concordance_ref | Source code |
| .distance_euclidean | Source code |
| .distance_icov | Source code |
| .distance_kendall | Source code |
| .distance_mahalanobis | Source code |
| .distance_pearson | Source code |
| .distance_pearson_shrink | Source code |
| .distance_quick_fix | Source code |
| .distance_spearman | Source code |
| .get_glm_limit | Source code |
| .get_kendall_limit | Source code |
| .get_mask | Source code |
| .get_nifti_ndims | Source code |
| .get_nifti_nvols | Source code |
| .onLoad | Source code |
| .onUnload | Source code |
| .read_funcs | Source code |
| .subdist_distance | Source code |
| .wrap_functionals | Source code |
| base_analyze_subdist | Source code |
| big_add_multiply_scalar | Source code |
| big_cor | Source code |
| big_rowmean | Source code |
| big_rowsum | Source code |
| big_ztransform | Source code |
| bm.get_col | Source code |
| bm.save_col | Source code |
| check_all_dists | Source code |
| check_design_matrix | Source code |
| check_dmat | Source code |
| check_func_data | Source code |
| check_funcs.voxs | Source code |
| check_gmat | Source code |
| check_subdist | Source code |
| clust_mdmr | Source code |
| clust_mdmr.clusterize | Source code |
| clust_mdmr.correct | Source code |
| clust_mdmr.correct_wrapper | Source code |
| clust_mdmr.get_pvals_for_each_perm | Source code |
| clust_mdmr.pvalues | Source code |
| clust_mdmr.values | Source code |
| cluster.table | Source code |
| compute_subdist | Source code |
| compute_subdist2 | Source code |
| compute_subdist3 | Source code |
| compute_subdist_sge_wrapper3 | Source code |
| compute_subdist_worker | Source code |
| compute_subdist_worker2 | Source code |
| compute_subdist_worker2_regress | Source code |
| compute_subdist_worker3 | Source code |
| compute_subdist_worker3_regress | Source code |
| compute_subdist_wrapper | Source code |
| compute_subdist_wrapper3 | Source code |
| connectir | Man page |
| connectir-package | Man page |
| create_maskoverlap | Source code |
| create_maskoverlap_fromfuncs | Source code |
| create_subdist | Source code |
| detect_ftypes | Source code |
| exclude_sub_masks | Source code |
| filter_subdist | Source code |
| filter_subdist_fb | Source code |
| formula_to_bmat | Source code |
| formula_to_mat | Source code |
| gb2n | Source code |
| gcor | Source code |
| gen_big_reader | Source code |
| get_funclist_tpts | Source code |
| get_gcor_limit | Source code |
| get_mdmr_memlimit | Source code |
| get_sdist_analysis_limit | Source code |
| get_subdist_memlimit | Source code |
| glm_summarize | Source code |
| glmnet_subdist_cross | Source code |
| gower.subdist | Source code |
| gower.subdist2 | Source code |
| icov | Source code |
| is.installed | Source code |
| kendall | Source code |
| kendall3 | Source code |
| kendall_cpp | Source code |
| kendall_ref | Source code |
| kmeans_subdist_cross | Source code |
| load_and_mask_func_data2 | Source code |
| load_and_mask_func_data3 | Source code |
| load_func_data | Source code |
| load_funcs | Source code |
| load_funcs.mask | Source code |
| load_funcs.prepare | Source code |
| load_funcs.read | Source code |
| load_funcs.read_and_scale | Source code |
| load_funcs.scale | Source code |
| mask.auto | Source code |
| mask.read | Source code |
| mask_func_data | Source code |
| mb2n | Source code |
| mdmr | Source code |
| mdmr.fstats_to_pvals | Source code |
| mdmr.prepare.fperms | Source code |
| mdmr.prepare.model | Source code |
| mdmr.prepare.permH2s | Source code |
| mdmr.prepare.permIH | Source code |
| mdmr.prepare.permutations | Source code |
| mdmr.prepare.pmat | Source code |
| mdmr.sge | Source code |
| mdmr.worker | Source code |
| mdmr.worker2 | Source code |
| mdmr_model | Source code |
| mdmr_model.df | Source code |
| mdmr_model.hat_matrices | Source code |
| mdmr_model.hat_matrix_2 | Source code |
| mdmr_model.hat_matrix_ih | Source code |
| mdmr_model.qr | Source code |
| mdmr_model.rank | Source code |
| mdmr_model.rhs | Source code |
| mdmr_perms | Source code |
| mdmr_perms.cor_with_perm | Source code |
| mdmr_perms.gather_H2perms_for_factor | Source code |
| mdmr_perms.gather_H2s | Source code |
| mdmr_perms.gather_IHperms_for_factor | Source code |
| mdmr_perms.gather_IHs | Source code |
| mdmr_perms.gather_perms | Source code |
| mdmr_perms.gather_perms_for_factor | Source code |
| mdmr_perms.to_integer | Source code |
| n2gb | Source code |
| n2mb | Source code |
| norm_glasso | Source code |
| overlap_masks | Source code |
| parallelize | Source code |
| pcor | Source code |
| printf | Source code |
| read.big.csv | Source code |
| read.big.matlab | Source code |
| read.big.nifti2d | Source code |
| read.big.space | Source code |
| reho | Source code |
| reho_worker | Source code |
| roi_mean | Source code |
| roi_mean_wrapper | Source code |
| save_mdmr | Source code |
| save_mdmr.factors | Source code |
| save_mdmr.formula | Source code |
| save_mdmr.hat_matrices | Source code |
| save_mdmr.model | Source code |
| save_mdmr.modelinfo | Source code |
| save_mdmr.permutations | Source code |
| save_mdmr.pvals_and_zstats | Source code |
| set_parallel_procs | Source code |
| square.subdist | Source code |
| subdist.check_funcs | Source code |
| subdist.create_dists | Source code |
| subdist.memory_limit | Source code |
| subdist.prepare_and_mask_funcs | Source code |
| subdist.prepare_funcs | Source code |
| subdist.prepare_mask | Source code |
| subdist.read_regressors | Source code |
| subdist_wrapper | Source code |
| svm_subdist_cross | Source code |
| test_sdist | Source code |
| tf.freqs | Source code |
| tf.pspec | Source code |
| tmp | Man page |
| vbca | Source code |
| vbca2 | Source code |
| vbca3 | Source code |
| vbca_batch | Source code |
| vbca_batch2 | Source code |
| vbca_batch3 | Source code |
| vcat | Source code |
| vox_base_cross | Source code |
| vox_glm | Source code |
| vox_glm3 | Source code |
| vox_glmnet_cross | Source code |
| vox_svm_cross | Source code |
| vstop | Source code |
| vsystem | Source code |
| wrap_functionals | Source code |
| wrap_gcor | Source code |
| wrap_glm | Source code |
| wrap_glmnet_subdist_cross | Source code |
| wrap_kendall | Source code |
| wrap_kmeans_subdist_cross | Source code |
| wrap_reho | Source code |
| wrap_svm_subdist_cross | Source code |
