API for czarrar/connectir
connectir 0.2.1

Global functions
archive.load_and_mask_func_data Source code
base_analyze_subdist Source code
big_add_multiply_scalar Source code
big_cor Source code
big_rowmean Source code
big_rowsum Source code
big_ztransform Source code
bm.get_col Source code
bm.save_col Source code
check_all_dists Source code
check_design_matrix Source code
check_dmat Source code
check_func_data Source code
check_func_paths Source code
check_funcs.voxs Source code
check_gmat Source code
check_mask_paths Source code
check_subdist Source code
clust_mdmr Source code
clust_mdmr.clusterize Source code
clust_mdmr.correct Source code
clust_mdmr.correct_wrapper Source code
clust_mdmr.get_pvals_for_each_perm Source code
clust_mdmr.pvalues Source code
clust_mdmr.values Source code
cluster.table Source code
compute_subdist Source code
compute_subdist2 Source code
compute_subdist3 Source code
compute_subdist_sge_wrapper3 Source code
compute_subdist_worker Source code
compute_subdist_worker2 Source code
compute_subdist_worker2_regress Source code
compute_subdist_worker3 Source code
compute_subdist_worker3_regress Source code
compute_subdist_wrapper Source code
compute_subdist_wrapper3 Source code
connectir Man page
connectir-package Man page
create_maskoverlap Source code
create_maskoverlap_fromfuncs Source code
create_subdist Source code
detect_ftypes Source code
distance_chebyshev Source code
distance_concordance Source code
distance_concordance_ref Source code
distance_euclidean Source code
distance_icov Source code
distance_kendall Source code
distance_mahalanobis Source code
distance_pearson Source code
distance_pearson_shrink Source code
distance_quick_fix Source code
distance_spearman Source code
exclude_sub_masks Source code
filter_subdist Source code
filter_subdist_fb Source code
formula_to_bmat Source code
formula_to_mat Source code
gb2n Source code
gcor Source code
gen_big_reader Source code
get_funclist_tpts Source code
get_gcor_limit Source code
get_glm_limit Source code
get_kendall_limit Source code
get_mask Source code
get_mdmr_memlimit Source code
get_nifti_ndims Source code
get_nifti_nvols Source code
get_sdist_analysis_limit Source code
get_subdist_memlimit Source code
ginv Source code
glm_summarize Source code
glmnet_subdist_cross Source code
gower.subdist Source code
gower.subdist2 Source code
icov Source code
is.installed Source code
kendall Source code
kendall3 Source code
kendall_cpp Source code
kendall_ref Source code
kmeans_subdist_cross Source code
load_and_mask_func_data2 Source code
load_and_mask_func_data3 Source code
load_func_data Source code
load_funcs Source code
load_funcs.mask Source code
load_funcs.prepare Source code
load_funcs.read Source code
load_funcs.read_and_scale Source code
load_funcs.scale Source code
mask.auto Source code
mask.read Source code
mask_func_data Source code
mb2n Source code
mdmr Source code
mdmr.fstats_to_pvals Source code
mdmr.prepare.fperms Source code
mdmr.prepare.model Source code
mdmr.prepare.permH2s Source code
mdmr.prepare.permIH Source code
mdmr.prepare.permutations Source code
mdmr.prepare.pmat Source code
mdmr.sge Source code
mdmr.worker Source code
mdmr.worker2 Source code
mdmr_model Source code
mdmr_model.df Source code
mdmr_model.hat_matrices Source code
mdmr_model.hat_matrix_2 Source code
mdmr_model.hat_matrix_ih Source code
mdmr_model.qr Source code
mdmr_model.rank Source code
mdmr_model.rhs Source code
mdmr_perms Source code
mdmr_perms.cor_with_perm Source code
mdmr_perms.gather_H2perms_for_factor Source code
mdmr_perms.gather_H2s Source code
mdmr_perms.gather_IHperms_for_factor Source code
mdmr_perms.gather_IHs Source code
mdmr_perms.gather_perms Source code
mdmr_perms.gather_perms_for_factor Source code
mdmr_perms.to_integer Source code
n2gb Source code
n2mb Source code
norm_glasso Source code
onLoad Source code
onUnload Source code
overlap_masks Source code
parallelize Source code
pcor Source code
permuted.index Source code Source code
printf Source code
read.big.csv Source code
read.big.matlab Source code
read.big.nifti2d Source code
read.big.space Source code
read_funcs Source code
reho Source code
reho_worker Source code
roi_mean Source code
roi_mean_wrapper Source code
save_mdmr Source code
save_mdmr.factors Source code
save_mdmr.formula Source code
save_mdmr.hat_matrices Source code
save_mdmr.model Source code
save_mdmr.modelinfo Source code
save_mdmr.permutations Source code
save_mdmr.pvals_and_zstats Source code
set_parallel_procs Source code
square.subdist Source code
subdist.check_funcs Source code
subdist.create_dists Source code
subdist.memory_limit Source code
subdist.prepare_and_mask_funcs Source code
subdist.prepare_funcs Source code
subdist.prepare_mask Source code
subdist.read_regressors Source code
subdist_distance Source code
subdist_wrapper Source code
svm_subdist_cross Source code
test_sdist Source code
tf.freqs Source code
tf.pspec Source code
tmp Man page
vbca Source code
vbca2 Source code
vbca3 Source code
vbca_batch Source code
vbca_batch2 Source code
vbca_batch3 Source code
vcat Source code
vox_base_cross Source code
vox_glm Source code
vox_glm3 Source code
vox_glmnet_cross Source code
vox_svm_cross Source code
vstop Source code
vsystem Source code
wrap_functionals Source code Source code
wrap_gcor Source code
wrap_glm Source code
wrap_glmnet_subdist_cross Source code
wrap_kendall Source code
wrap_kmeans_subdist_cross Source code
wrap_reho Source code
wrap_svm_subdist_cross Source code
czarrar/connectir documentation built on Sept. 29, 2017, 12:31 a.m.