Files in czarrar/connectir

connectir 0.2.1

.gitignore

DESCRIPTION

NAMESPACE

NEWS

R/adonis.R R/analyze_subdist.R R/archive.R R/classification.R R/cor_advance.R R/cor_base.R R/mdmr.R R/mdmr_model.R R/mdmr_permutations.R R/memlimit.R R/misc.R R/multiple_comparisons.R R/qlm.R R/qlm_inline.R R/read.R R/scripts.R R/subdist.R R/subdist3.R R/subdist_sge.R

R/tests.R

R/tf.R R/utils.R R/wrappers.R R/zzz.R README.md

Read-and-delete-me

Screen Shot 2020-11-14 at 11.26.06 PM.png

cleanup

configure

cwas_analytic_workflow.png

data/standard_2mm.nii.gz

data/standard_4mm.nii.gz

data/test_func01.1D

data/test_func01.nii.gz

data/test_func01.txt

data/test_func02.1D

data/test_func02.nii.gz

data/test_func02.txt

data/test_func03.1D

data/test_func03.nii.gz

data/test_func03.txt

data/test_func04.1D

data/test_func04.nii.gz

data/test_func04.txt

data/test_func05.1D

data/test_func05.nii.gz

data/test_func05.txt

data/test_func06.1D

data/test_func06.nii.gz

data/test_func06.txt

data/test_func07.1D

data/test_func07.nii.gz

data/test_func07.txt

data/test_func08.1D

data/test_func08.nii.gz

data/test_func08.txt

data/test_func09.1D

data/test_func09.nii.gz

data/test_func09.txt

data/test_mask01.nii.gz

data/test_mask01.txt

data/test_mask02.nii.gz

data/test_mask02.txt

data/test_mask03.nii.gz

data/test_mask03.txt

data/test_mask04.nii.gz

data/test_mask04.txt

data/test_mask05.nii.gz

data/test_mask05.txt

data/test_mask06.nii.gz

data/test_mask06.txt

data/test_mask07.nii.gz

data/test_mask07.txt

data/test_mask08.nii.gz

data/test_mask08.txt

data/test_mask09.nii.gz

data/test_mask09.txt

data/test_mask_grp.nii.gz

data/test_mask_grp.txt

inst/include/connectir/connectir.h

inst/include/connectir/connectirDefines.h

inst/scripts/OLD_connectir_subdist.Revo

inst/scripts/connectir_bigmats_diff.R inst/scripts/connectir_bigmats_diff_worker.R inst/scripts/connectir_bigmats_mean.R inst/scripts/connectir_bigmats_mean_worker.R inst/scripts/connectir_filter_subdist.R

inst/scripts/connectir_filter_subdist.Revo

inst/scripts/connectir_filter_subdist_worker.R inst/scripts/connectir_gcor.R

inst/scripts/connectir_gcor.Revo

inst/scripts/connectir_gcor_worker.R inst/scripts/connectir_glm.R

inst/scripts/connectir_glm.Revo

inst/scripts/connectir_glm_worker.R inst/scripts/connectir_glmnet_cross.R

inst/scripts/connectir_glmnet_cross.Revo

inst/scripts/connectir_glmnet_cross_worker.R inst/scripts/connectir_kendall.R

inst/scripts/connectir_kendall.Revo

inst/scripts/connectir_kendall_worker.R inst/scripts/connectir_kmeans_cross.R

inst/scripts/connectir_kmeans_cross.Revo

inst/scripts/connectir_kmeans_cross_worker.R inst/scripts/connectir_mdmr.R

inst/scripts/connectir_mdmr.Revo

inst/scripts/connectir_mdmr_worker.R inst/scripts/connectir_reho.R

inst/scripts/connectir_reho.Revo

inst/scripts/connectir_reho_worker.R inst/scripts/connectir_roi_mean.R

inst/scripts/connectir_roi_mean.Revo

inst/scripts/connectir_roi_mean_worker.R inst/scripts/connectir_subdist.R

inst/scripts/connectir_subdist.Revo

inst/scripts/connectir_subdist_subset.R inst/scripts/connectir_subdist_subset_worker.R inst/scripts/connectir_subdist_worker.R inst/scripts/connectir_subdists_diff.R inst/scripts/connectir_subdists_mean.R inst/scripts/connectir_svm_cross.R

inst/scripts/connectir_svm_cross.Revo

inst/scripts/connectir_svm_cross_worker.R man/connectir-package.Rd man/tmp.Rd

src/adonis.cpp

src/arith.cpp

src/cor.cpp

src/extensions.cpp

src/qlm.cpp

src/subdist.cpp

src/subdist2.cpp

src/summary_stats.cpp

src/utils.cpp

tests/1.R tests/2.R tests/archive/matlab_mdmr.R tests/archive/matlab_subdist.R tests/archive/matlab_subidst_prep.R tests/archive/test_scratches.R tests/archive/testish.R tests/functions.R tests/inline.R tests/mdmr/mdmr_timing.R tests/mdmr/test_mdmr.R tests/mdmr/test_mdmr_cluster_correct.R tests/mdmr/test_mdmr_model.R tests/mdmr/test_mdmr_permutations.R tests/read/create_test_data.R tests/read/test_func.R tests/read/test_misc.R tests/read/test_timepoints.R tests/subdist/test_subdist3.R tests/subdist/test_subdist_general.R tests/subdist/test_subdist_sge.R tests/test_cor.R tests/test_global.R tests/test_kendall.R tests/test_mdmr.R tests/test_qlm.R tests/test_subdist.R

tests/test_svm.R

czarrar/connectir documentation built on Nov. 22, 2020, 12:13 p.m.