Files in cziegenhain/UMIcountR
tools for spike-in UMI analysis
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/UMIcountR-funs.R
R/UMIcountR-package.R
R/UMIcountR-utils.R
README.Rmd
README.md
UMIcountR.Rproj
data/molspike_barcodes_infos_fivep_final.RData
inst/extdata/Smartseq3.TTACCTGCCAGATTCG.bam
inst/extdata/Smartseq3.TTACCTGCCAGATTCG.bam.bai
inst/python/bktreeumis_ngram_nodepend.py
inst/python/bktreeumis_nodepend.py
man/UMIcountR-package.Rd
man/bc_correct.Rd
man/extract_complex_spike_dat.Rd
man/extract_spike_dat.Rd
man/figures/README-overrepresentation-1.png
man/figures/README-pressure-1.png
man/get_overrepresented_spikes.Rd
man/plot_spike_distances.Rd
man/return_corrected_umi.Rd
man/subsample_recompute.Rd
