get_nucl_dims: Determine Maximum Width and Height of Nuclei in a DAPI Mask
In dami82/CellSignalingTools: Analysis of Images for Molecular Biology Applications
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
Determine the maximum width and the maximum height (in pixels) of DAPI areas identified as nuclei.
Usage
1
get_nucl_dims(dapi_range)
Arguments
dapi_range
is a boolean matrix. Typically, this is the result of a get_dapi_range() call.
Value
It returns an integer vector containing two elements
Author(s)
Damiano Fantini
References
http://www.biotechworld.it/bioinf/2016/03/09/analyzing-fluoresence-microscopy-data-with-r/
Examples
1
2
3
data("leio_cells_dapi")
dapi_mask <- get_dapi_range(leio_cells_dapi, 0.05)
get_nucl_dims(dapi_mask)
dami82/CellSignalingTools documentation built on May 14, 2019, 3:32 p.m.
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Description Usage Arguments Value Author(s) References Examples
Description
Determine the maximum width and the maximum height (in pixels) of DAPI areas identified as nuclei.
Usage
1 | get_nucl_dims(dapi_range)
|
Arguments
dapi_range |
is a boolean matrix. Typically, this is the result of a get_dapi_range() call. |
Value
It returns an integer vector containing two elements
Author(s)
Damiano Fantini
References
http://www.biotechworld.it/bioinf/2016/03/09/analyzing-fluoresence-microscopy-data-with-r/
Examples
1 2 3 | data("leio_cells_dapi")
dapi_mask <- get_dapi_range(leio_cells_dapi, 0.05)
get_nucl_dims(dapi_mask)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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