mutationSignatures-class: Class '"mutationSignatures"'

In dami82/mutSignatures_dev: Decipher Mutational Signatures from Somatic Mutational Catalogs

Objects from the Class

Objects can be created by calls of the form new("mutationSignatures", x, muts, signNames).

Slots

mutationFreq:

Object of class "data.frame" ~~

mutTypes:

Object of class "data.frame" ~~

signatureId:

Object of class "data.frame" ~~

Methods

as.data.frame

signature(x = "mutationSignatures"): ...

as.list

signature(x = "mutationSignatures"): ...

[

signature(x = "mutationSignatures", i = "numeric", j = "ANY", drop = "ANY"): ...

cbind2

signature(x = "mutationSignatures", y = "mutationSignatures"): ...

coerceObj

signature(x = "mutationSignatures", to = "character"): ...

getMutationTypes

signature(x = "mutationSignatures"): ...

getSignatureIdentifiers

signature(x = "mutationSignatures"): ...

initialize

signature(.Object = "mutationSignatures"): ...

plot

signature(x = "mutationSignatures", y = "ANY"): ...

print

signature(x = "mutationSignatures"): ...

show

signature(object = "mutationSignatures"): ...

Examples

showClass("mutationSignatures")

dami82/mutSignatures_dev documentation built on May 17, 2019, 7:02 p.m.