TCGAquery_MatchedCoupledSampleTypes: Retrieve multiple tissue types from the same patients.
In daniel615212950/TCGAbiolinks: TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Description
Usage
Arguments
Value
Examples
Description
TCGAquery_MatchedCoupledSampleTypes
Usage
1
TCGAquery_MatchedCoupledSampleTypes(barcode, typesample)
Arguments
barcode
barcode
typesample
typesample
Value
a list of samples / barcode filtered by type sample selected
Examples
1
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5
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TCGAquery_MatchedCoupledSampleTypes(c("TCGA-B0-4698-01Z-00-DX1",
"TCGA-B0-4698-02Z-00-DX1"),
c("TP","TR"))
barcode <- c("TARGET-20-PANSBH-02A-02D","TARGET-20-PANSBH-01A-02D",
"TCGA-B0-4698-01Z-00-DX1","TCGA-CZ-4863-02Z-00-DX1",
"TARGET-20-PANSZZ-02A-02D","TARGET-20-PANSZZ-11A-02D",
"TCGA-B0-4699-01Z-00-DX1","TCGA-B0-4699-02Z-00-DX1"
)
TCGAquery_MatchedCoupledSampleTypes(barcode,c("TR","TP"))
daniel615212950/TCGAbiolinks documentation built on Dec. 19, 2021, 8:06 p.m.
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Description Usage Arguments Value Examples
Description
TCGAquery_MatchedCoupledSampleTypes
Usage
1 | TCGAquery_MatchedCoupledSampleTypes(barcode, typesample)
|
Arguments
barcode |
barcode |
typesample |
typesample |
Value
a list of samples / barcode filtered by type sample selected
Examples
1 2 3 4 5 6 7 8 9 | TCGAquery_MatchedCoupledSampleTypes(c("TCGA-B0-4698-01Z-00-DX1",
"TCGA-B0-4698-02Z-00-DX1"),
c("TP","TR"))
barcode <- c("TARGET-20-PANSBH-02A-02D","TARGET-20-PANSBH-01A-02D",
"TCGA-B0-4698-01Z-00-DX1","TCGA-CZ-4863-02Z-00-DX1",
"TARGET-20-PANSZZ-02A-02D","TARGET-20-PANSZZ-11A-02D",
"TCGA-B0-4699-01Z-00-DX1","TCGA-B0-4699-02Z-00-DX1"
)
TCGAquery_MatchedCoupledSampleTypes(barcode,c("TR","TP"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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