aggregrateDataForK: Aggregate a matrix of dimension M to dimension K by taking...
In danjlawson/badMIXTURE: Validating Structure With Chromosome Painting
View source: R/privateFunctions.R
Description
Cut a tree for the rows of a matrix to get K tips
Make the popdata that has this new set of rows by taking row means (or whatever combine is set to do)
Usage
1
2
aggregrateDataForK(popdataraw, popdend, K, combine = matColMeans,
simplify = TRUE)
Arguments
popdataraw
A matrix
popdend
A dendrogram relating the rows of popdataraw
K
A height at which to cut the dendrogram
combine
A function to combine columns of popdataraw
simplify
Whether to simplify the labels of the dendrogram after it has been cut
danjlawson/badMIXTURE documentation built on Sept. 27, 2019, 9:11 p.m.
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View source: R/privateFunctions.R
Description
Cut a tree for the rows of a matrix to get K tips Make the popdata that has this new set of rows by taking row means (or whatever combine is set to do)
Usage
1 2 | aggregrateDataForK(popdataraw, popdend, K, combine = matColMeans,
simplify = TRUE)
|
Arguments
popdataraw |
A matrix |
popdend |
A dendrogram relating the rows of popdataraw |
K |
A height at which to cut the dendrogram |
combine |
A function to combine columns of popdataraw |
simplify |
Whether to simplify the labels of the dendrogram after it has been cut |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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