Man pages for databio/RPIM
Assess epigenetic heterogeneity with proportion of intermediate methylation
| BScredInterval | Get credibility interval via binomial bayes distribution |
| BScredIntervalCache | Get credibility interval via binomial bayes distribution and... |
| bsDataCheck | Check bisulfite sequencing data and convert if needed |
| BSDTlist | A named 'list' of 4 'data.table' objects, each of which has... |
| cacheBinomConfIntervals | Cache binomial confidence intervals |
| calculateRPIM | Helper function to get the relative proportion of flagged... |
| exampleBSDT | A data.table containing methylation data (position, number... |
| PIM | Given bisulfite sequencing data, calculates the proportion of... |
| prepIM | Prepares the intermediate methylation (IM) table |
| RPIM | Calculate the relative proportion of intermediate methylation... |
| singleSample | Check to see if bisulfite sequencing data has only one sample |
