This package contains: 1. A microarray gene expression dataset from a human breast cancer study. 2. A RNA-Seq gene expression dataset from a mouse study on IFNG knockout. 3. ID mapping tables between gene IDs and SBGN-ML file glyph IDs. 4. Percent of orthologs detected in other species of the genes in a pathway. Cutoffs of this percentage for defining if a pathway exists in another species. 5. XML text of SBGN-ML files for all pre-collected pathways.
Package details |
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Author | Xiaoxi Dong*, Kovidh Vegesna*, Weijun Luo |
Bioconductor views | BreastCancerData CancerData ExperimentData GEO MicroarrayData RNASeqData |
Maintainer | Weijun Luo <luo_weijun@yahoo.com> |
License | AGPL-3 |
Version | 1.5.1 |
Package repository | View on GitHub |
Installation |
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