sc_dorothea_viper: Dorothea-Viper TF Activity estimation
In dbdimitrov/BugleSeq: BingleSeq RNA-Seq Data Analysis
Description
Usage
Arguments
Value
View source: R/sc_footprintTab.R
Description
Dorothea-Viper TF Activity estimation
Usage
1
sc_dorothea_viper(s_object, tf_num, regulon)
Arguments
s_object
Seurat object with clustering results
tf_num
Minimum Regulon size
regulon
dorothea regulon (human or mouse)
Value
Returns a table with TF activity scores ready for display
dbdimitrov/BugleSeq documentation built on July 17, 2021, 1:02 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/sc_footprintTab.R
Description
Dorothea-Viper TF Activity estimation
Usage
1 | sc_dorothea_viper(s_object, tf_num, regulon)
|
Arguments
s_object |
Seurat object with clustering results |
tf_num |
Minimum Regulon size |
regulon |
dorothea regulon (human or mouse) |
Value
Returns a table with TF activity scores ready for display
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.