sc_getDEgenes: Get Differentially Expressed Genes (Single Cell)

In dbdimitrov/BugleSeq: BingleSeq RNA-Seq Data Analysis

Description

Filters the DE results table and returns the names of the DE genes

Usage

sc_getDEgenes(data, type, pvalue, fchange, byClust, clusterNo)

Arguments

data	Differential Expression Reslts Table
type	Filters by abs. significant, upregulation or downregulation
pvalue	P-value threshold
fchange	Fold-Change threshold
condition	Filters by a given condition (AvB, BvC, etc.)

Value

Returns a vector with DE gene names

dbdimitrov/BugleSeq documentation built on July 17, 2021, 1:02 p.m.