sc_progeny: Progeny Pathway Activity estimation
In dbdimitrov/BugleSeq: BingleSeq RNA-Seq Data Analysis
Description
Usage
Arguments
Value
View source: R/sc_footprintTab.R
Description
Progeny Pathway Activity estimation
Usage
1
sc_progeny(s_object, organism, top, perm)
Arguments
s_object
Seurat object with clustering results
organism
Human or Mouse Model Organism
top
No. of most variable genes per pathway
perm
No. of permutations to be performed
Value
Returns a table with Pathway activity scores ready for display
dbdimitrov/BugleSeq documentation built on July 17, 2021, 1:02 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/sc_footprintTab.R
Description
Progeny Pathway Activity estimation
Usage
1 | sc_progeny(s_object, organism, top, perm)
|
Arguments
s_object |
Seurat object with clustering results |
organism |
Human or Mouse Model Organism |
top |
No. of most variable genes per pathway |
perm |
No. of permutations to be performed |
Value
Returns a table with Pathway activity scores ready for display
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.