sueratClust: Seurat Clustering Pipeline

In dbdimitrov/BugleSeq: BingleSeq RNA-Seq Data Analysis

Description

Seurat Clustering Pipeline

Usage

sueratClust(s_object, dimNo, resQuant, algorithmNo, session)

Arguments

s_object	Seurat object with scaled and PCA data
dimNo	Number of dimensions to be used when clustering
resQuant	Resolution parameter used to control the number of clusters
algorithmNo	The clustering algorithm to be used
session	Current R session

Value

Returns a list containing a Seurat object with clustering data and a tSNE plot

dbdimitrov/BugleSeq documentation built on July 17, 2021, 1:02 p.m.