latentSpace: GET CellTrails' latent space
In dcellwanger/CellTrails: Reconstruction, visualization and analysis of branching trajectories
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
Description
Retrieve computed latent space from a SingleCellExperiment object.
Usage
1
latentSpace(object)
Arguments
object
A SingleCellExperiment object
Details
Returns the latent space set for a CellTrails analysis. The
resulting matrix is numeric. Rows are samples and columns are d
components. It is a wrapper for reducedDim to ensure
that the proper matrix is received from a SingleCellExperiment
object.
Value
An object of class matrix
Author(s)
Daniel C. Ellwanger
See Also
SingleCellExperiment reducedDim
Examples
1
2
3
4
5
# Example data
data(exSCE)
# Get latent space
latentSpace(exSCE)[seq_len(5), ]
dcellwanger/CellTrails documentation built on May 12, 2020, 2:01 a.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
Description
Retrieve computed latent space from a SingleCellExperiment object.
Usage
1 | latentSpace(object)
|
Arguments
object |
A |
Details
Returns the latent space set for a CellTrails analysis. The
resulting matrix is numeric. Rows are samples and columns are d
components. It is a wrapper for reducedDim to ensure
that the proper matrix is received from a SingleCellExperiment
object.
Value
An object of class matrix
Author(s)
Daniel C. Ellwanger
See Also
SingleCellExperiment reducedDim
Examples
1 2 3 4 5 | # Example data
data(exSCE)
# Get latent space
latentSpace(exSCE)[seq_len(5), ]
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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