ct_sd_plot: QC plot of Ct standard deviation of technical replicates

In dcorujog/qpcr-package: Analysis of qPCR data with the delta Ct method

QC plot of Ct standard deviation of technical replicates

Description

QC plot of Ct standard deviation of technical replicates

Usage

ct_sd_plot(
  norm_data,
  max_sd = sd(c(0, 0.5)),
  max_ct = 35,
  exp_name = "exp_name"
)

Arguments

norm_data	data frame with the normalized qPCR data as generated bu the qpcr_analysis
max_sd	maximum standard deviation value between technical replicates to be considered acceptable, a horizontal red line will be drawn in the plot at this value (default = sd(c(0, 0.5)))
max_ct	maximum Ct value considered for quantitative range, a vertical red line will be drawn in the plot at this value (default = 35)
exp_name	experiment name (used as plot title and to name the saved file)

Value

a pdf file is saved with the corresponding plot

dcorujog/qpcr-package documentation built on Sept. 4, 2023, 3:04 p.m.