conservationMatrix-methods: Compute the conservation score matrix from a MSA
In ddiez/motiftools: Tools to analyze sequence motifs
Description
Usage
Arguments
Examples
Description
Compute the conservation score matrix from a multiple sequence alignment (MSA)
according to the method described in the software Jalview (htt://www.jalview.org).
Usage
1
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conservationMatrix(object)
## S4 method for signature 'AAMultipleAlignment'
conservationMatrix(object)
Arguments
object
AAMultipleAlignment alignment object (or a matrix).
Examples
1
ddiez/motiftools documentation built on May 8, 2020, 11:38 a.m.
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Description Usage Arguments Examples
Description
Compute the conservation score matrix from a multiple sequence alignment (MSA) according to the method described in the software Jalview (htt://www.jalview.org).
Usage
1 2 3 4 | conservationMatrix(object)
## S4 method for signature 'AAMultipleAlignment'
conservationMatrix(object)
|
Arguments
object |
AAMultipleAlignment alignment object (or a matrix). |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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