deWitLab/peakC: Perform peak calling for 4C/Capture-C experiments

4C/Capture-C data show a non-uniform distribution. By employing monotonic regression, an emperical background model is estimated and increases above this background model are called as peaks (interactions).

Getting started

Package details

AuthorElzo de Wit, Geert Geeven
MaintainerElzo de Wit <[email protected]>
LicenseGPL
Version0.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("deWitLab/peakC")
deWitLab/peakC documentation built on May 6, 2018, 8:50 p.m.