Man pages for deWitLab/peakC
Perform peak calling for 4C/Capture-C experiments
| combined.analysis | Combined 4C/Capture C analysis |
| combine.experiments | Combine list of experiments into a matrix with the background... |
| data.frame.to.peakC | Transform a data frame to a list that can be used as input... |
| hello | Hello, World! |
| pairwise.jaccard | Single experiment Jaccard similarity calculation |
| plot_C | Take a result from the combined.analysis function and... |
| readMatrix | Quickly read and normalize a matrix formatted file |
| readMultiColumnFile | Read in a multiple experiment file |
| readMultiple | Read in a list of matrix files |
| readMultipleWig | Read in a list of wig files |
| readqWig | Quickly read and normalize a wig formatted file |
| rem | Remove leading and trailing values |
| running | Title |
| single.analysis | Single experiment 4C/Capture C analysis |
